Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| qace family quaternary ammonium compound efflux smr transporter | C5P43_23490 | Not Available | Positive | 4216887 - 4216975 | 3210.06 |
| histidinol dehydrogenase | C5P43_23495 | Not Available | Positive | 4216976 - 4218213 | 43344.5 |
| histidinol-phosphate transaminase | C5P43_23500 | Not Available | Positive | 4218210 - 4219280 | 39420.4 |
| bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisb | C5P43_23505 | Not Available | Positive | 4219280 - 4220347 | 40251.3 |
| imidazole glycerol phosphate synthase subunit hish | C5P43_23510 | Not Available | Positive | 4220347 - 4220937 | 21644.1 |
| 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase | C5P43_23515 | Not Available | Positive | 4220937 - 4221417 | 17129.5 |
| amidohydrolase | C5P43_23520 | Not Available | Negative | 4221418 - 4222049 | 23611.3 |
| inhibitor of vertebrate lysozyme | C5P43_23525 | Not Available | Positive | 4222203 - 4222676 | 16873.2 |
| acyl-coa dehydrogenase | C5P43_23530 | Not Available | Negative | 4222719 - 4225163 | 89201.6 |
| phosphoheptose isomerase | C5P43_23535 | Not Available | Positive | 4225403 - 4225851 | 15935.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





