Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | C5P43_23195 | Not Available | Negative | 4170593 - 4171309 | 27293.6 |
| hypothetical protein | C5P43_23200 | Not Available | Positive | 4171405 - 4171545 | 4886.09 |
| trna/rrna methyltransferase | C5P43_23205 | Not Available | Positive | 4171945 - 4172631 | 25302.6 |
| thr operon leader peptide | C5P43_23210 | Not Available | Positive | 4172845 - 4172910 | 2138.61 |
| bifunctional aspartate kinase/homoserine dehydrogenase i | C5P43_23215 | Not Available | Positive | 4172991 - 4175098 | 76380.4 |
| hypothetical protein | C5P43_23220 | Not Available | Negative | 4175099 - 4175463 | 13089.3 |
| dtw domain-containing protein | C5P43_23225 | Not Available | Negative | 4175495 - 4176193 | 25924.4 |
| thiol disulfide reductase thioredoxin | C5P43_23230 | Not Available | Negative | 4176262 - 4176681 | 15555.6 |
| hypothetical protein | C5P43_23235 | Not Available | Positive | 4176695 - 4176898 | 7646.15 |
| trna/rrna methyltransferase | C5P43_23240 | Not Available | Positive | 4176888 - 4177925 | 37802.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





