Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chaperone protein clpb | C5P43_23145 | Not Available | Negative | 4160562 - 4163135 | 95590.8 |
| peptidoglycan editing factor pgef | C5P43_23150 | Not Available | Negative | 4163265 - 4163996 | 26353.4 |
| 23s rrna pseudouridine(1911/1915/1917) synthase rlud | C5P43_23155 | Not Available | Negative | 4163993 - 4164973 | 37139.9 |
| outer membrane protein assembly factor bamd | C5P43_23160 | Not Available | Positive | 4165108 - 4165304 | 7330.68 |
| glutamate--ammonia ligase | C5P43_23165 | Not Available | Negative | 4165341 - 4166726 | 51037.6 |
| transporter | C5P43_23170 | Not Available | Negative | 4166878 - 4167030 | 5796.15 |
| translational gtpase typa | C5P43_23175 | Not Available | Positive | 4167123 - 4168946 | 67359.5 |
| utra domain-containing protein | C5P43_23180 | Not Available | Positive | 4169163 - 4169873 | 26887.2 |
| ap endonuclease | C5P43_23185 | Not Available | Positive | 4169881 - 4170220 | 12514.1 |
| cell envelope integrity protein cred | C5P43_23190 | Not Available | Positive | 4170221 - 4170533 | 11382.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





