Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein yoei | C5P43_22935 | Not Available | Positive | 4123456 - 4123518 | 2241.66 |
| putrescine/spermidine abc transporter | C5P43_22940 | Not Available | Positive | 4123508 - 4124592 | 39258.8 |
| dead/deah box helicase | C5P43_22945 | Not Available | Negative | 4124593 - 4125512 | 35886.4 |
| restriction endonuclease subunit s | C5P43_22950 | Not Available | Negative | 4125634 - 4126896 | 48128.7 |
| type i restriction-modification system subunit m | C5P43_22955 | Not Available | Negative | 4126893 - 4128449 | 57789.2 |
| duf4942 domain-containing protein | C5P43_22960 | Not Available | Positive | 4128755 - 4129588 | 31749.8 |
| s-adenosylhomocysteine hydrolase | C5P43_22965 | Not Available | Positive | 4129658 - 4129901 | 9045.11 |
| hypothetical protein | C5P43_22970 | Not Available | Positive | 4129902 - 4130917 | 37854.4 |
| hypothetical protein | C5P43_22975 | Not Available | Positive | 4130928 - 4132280 | 50779.5 |
| type vi secretion system tube protein hcp | C5P43_22980 | Not Available | Positive | 4132304 - 4132786 | 18000.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





