Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mce family protein | C5P43_22775 | Not Available | Negative | 4095876 - 4097915 | 72983.5 |
| carbon starvation protein a | C5P43_22780 | Not Available | Negative | 4097916 - 4098229 | 11616.5 |
| hypothetical protein | C5P43_22785 | Not Available | Negative | 4098397 - 4098543 | 5279.29 |
| 4-hydroxyphenylacetate 3-monooxygenase reductase component | C5P43_22790 | Not Available | Negative | 4098622 - 4099134 | 18522.7 |
| 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component | C5P43_22795 | Not Available | Negative | 4099152 - 4100714 | 58868.0 |
| 4-hydroxyphenylacetate catabolism regulatory protein hpaa | C5P43_22800 | Not Available | Negative | 4100965 - 4101855 | 34332.0 |
| 4-hydroxyphenylacetate permease | C5P43_22805 | Not Available | Negative | 4101865 - 4103241 | 50571.6 |
| aminodeoxychorismate lyase | C5P43_22810 | Not Available | Negative | 4103285 - 4103450 | 6118.44 |
| beta-ketoacyl-[acyl-carrier-protein] synthase ii | C5P43_22815 | Not Available | Negative | 4103570 - 4104811 | 43048.3 |
| acyl carrier protein | C5P43_22820 | Not Available | Negative | 4104899 - 4105135 | 8639.99 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





