Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system response regulator creb | C5P43_22435 | Not Available | Positive | 4045710 - 4046399 | 26127.8 |
| two-component system sensor histidine kinase crec | C5P43_22440 | Not Available | Positive | 4046399 - 4047823 | 52220.2 |
| cell envelope integrity protein cred | C5P43_22445 | Not Available | Positive | 4047881 - 4048056 | 6670.46 |
| multidrug transporter emrd | C5P43_22450 | Not Available | Negative | 4048124 - 4049308 | 42218.5 |
| hypothetical protein | C5P43_22455 | Not Available | Negative | 4049348 - 4049632 | 10269.7 |
| type i toxin-antitoxin system toxin tisb | C5P43_22460 | Not Available | Negative | 4049727 - 4049816 | 3195.29 |
| lexa family transcriptional regulator | C5P43_22465 | Not Available | Negative | 4049813 - 4049926 | 4149.21 |
| hypothetical protein | C5P43_22470 | Not Available | Negative | 4049949 - 4050107 | 6080.62 |
| hypothetical protein | C5P43_22475 | Not Available | Negative | 4050104 - 4050394 | 10741.2 |
| ilvb operon leader peptide ivbl | C5P43_22480 | Not Available | Positive | 4050381 - 4050479 | 3256.17 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





