Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit l | C5P43_22330 | Not Available | Negative | 4027200 - 4029041 | 66458.1 |
| nadh-quinone oxidoreductase subunit k | C5P43_22335 | Not Available | Negative | 4029038 - 4029340 | 10845.8 |
| nadh-quinone oxidoreductase subunit j | C5P43_22340 | Not Available | Negative | 4029337 - 4029891 | 19875.9 |
| nadh-quinone oxidoreductase subunit i | C5P43_22345 | Not Available | Negative | 4029903 - 4030445 | 20538.9 |
| nadh-quinone oxidoreductase subunit h | C5P43_22350 | Not Available | Negative | 4030460 - 4030870 | 15458.3 |
| hypothetical protein | C5P43_22355 | Not Available | Negative | 4030996 - 4031478 | 18025.5 |
| Trna-met | Not Available | Not Available | Positive | 4032229 - 4032304 | Not Available |
| hypothetical protein | C5P43_22370 | Not Available | Positive | 4034764 - 4035117 | 12643.2 |
| protein csid | C5P43_22375 | Not Available | Positive | 4035453 - 4036430 | 37386.6 |
| hypothetical protein | C5P43_22380 | Not Available | Positive | 4036450 - 4036610 | 5655.89 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





