Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tail assembly protein | C5P43_22280 | Not Available | Negative | 4018880 - 4019263 | 13129.2 |
| l-asparaginase 1 | C5P43_22285 | Not Available | Negative | 4019264 - 4020066 | 29722.6 |
| signal peptide peptidase sppa | C5P43_22290 | Not Available | Negative | 4020233 - 4022089 | 67160.0 |
| hypothetical protein | C5P43_22295 | Not Available | Negative | 4022032 - 4022196 | 5836.02 |
| nad(p)h nitroreductase | C5P43_22300 | Not Available | Positive | 4022250 - 4022801 | 20060.1 |
| hypothetical protein | C5P43_22305 | Not Available | Positive | 4022827 - 4022976 | 5567.61 |
| selenide, water dikinase seld | C5P43_22310 | Not Available | Positive | 4022918 - 4023961 | 36705.5 |
| dna topoisomerase iii | C5P43_22315 | Not Available | Positive | 4023966 - 4025119 | 43535.0 |
| nadh-quinone oxidoreductase subunit n | C5P43_22320 | Not Available | Negative | 4025120 - 4025500 | 13691.2 |
| nadh-quinone oxidoreductase subunit m | C5P43_22325 | Not Available | Negative | 4025507 - 4027036 | 56527.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





