Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1161 domain-containing protein | C5P43_22230 | Not Available | Negative | 4009366 - 4009671 | 10491.3 |
| ynfc family lipoprotein | C5P43_22235 | Not Available | Positive | 4009779 - 4010489 | 26508.3 |
| spermidine n1-acetyltransferase | C5P43_22240 | Not Available | Negative | 4010492 - 4011052 | 21902.3 |
| hypothetical protein | C5P43_22245 | Not Available | Negative | 4011087 - 4011428 | 12943.4 |
| ynfa family protein | C5P43_22250 | Not Available | Positive | 4011563 - 4011889 | 11920.2 |
| hypothetical protein | C5P43_22255 | Not Available | Positive | 4011926 - 4012114 | 7302.75 |
| starvation-sensing protein rspa | C5P43_22260 | Not Available | Positive | 4012095 - 4013309 | 45971.0 |
| short-chain fatty acid transporter | C5P43_22265 | Not Available | Negative | 4013401 - 4014608 | 38502.8 |
| ail/lom family protein | C5P43_22270 | Not Available | Negative | 4014673 - 4015272 | 21633.8 |
| host specificity protein j | C5P43_22275 | Not Available | Negative | 4015340 - 4018819 | 127035.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





