Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonucleoside-diphosphate reductase 2 subunit beta | C5P43_22030 | Not Available | Negative | 3963185 - 3964144 | 36445.1 |
| ribonucleotide-diphosphate reductase subunit alpha | C5P43_22035 | Not Available | Negative | 3964154 - 3965278 | 42190.9 |
| spermidine/putrescine abc transporter substrate-binding protein potd | C5P43_22040 | Not Available | Positive | 3965279 - 3965614 | 12204.5 |
| duf3592 domain-containing protein | C5P43_22045 | Not Available | Positive | 3965672 - 3966133 | 17311.5 |
| hypothetical protein | C5P43_22050 | Not Available | Positive | 3966130 - 3966468 | 12241.4 |
| hypothetical protein | C5P43_22055 | Not Available | Positive | 3966571 - 3966918 | 12779.8 |
| nad-dependent deacylase | C5P43_22060 | Not Available | Negative | 3967057 - 3967878 | 30938.2 |
| n-acetylglucosamine kinase | C5P43_22065 | Not Available | Negative | 3967894 - 3968805 | 33086.7 |
| lipoprotein-releasing abc transporter permease subunit lole | C5P43_22070 | Not Available | Negative | 3968834 - 3970078 | 45356.0 |
| lipoprotein-releasing system atp-binding protein lold | C5P43_22075 | Not Available | Negative | 3970078 - 3970779 | 25439.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





