Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-ketoglutarate permease | C5P43_21875 | Not Available | Positive | 3935128 - 3936426 | 47055.3 |
| lipoprotein | C5P43_21880 | Not Available | Negative | 3936423 - 3936746 | 11805.9 |
| phosphatidylserine synthase | C5P43_21885 | Not Available | Negative | 3936792 - 3938147 | 52804.8 |
| protein lysine acetyltransferase | C5P43_21890 | Not Available | Negative | 3938261 - 3940683 | 89565.5 |
| phosphoenolpyruvate carboxylase | C5P43_21895 | Not Available | Negative | 3940684 - 3943031 | 87748.7 |
| acetylornithine deacetylase | C5P43_21900 | Not Available | Negative | 3943383 - 3944534 | 42349.7 |
| n-acetyl-gamma-glutamyl-phosphate reductase | C5P43_21905 | Not Available | Positive | 3944688 - 3945692 | 35954.1 |
| acetylglutamate kinase | C5P43_21910 | Not Available | Positive | 3945700 - 3946476 | 27161.3 |
| argininosuccinate lyase | C5P43_21915 | Not Available | Positive | 3946537 - 3946859 | 12052.3 |
| tmao reductase system protein tort | C5P43_21920 | Not Available | Positive | 3946860 - 3947165 | 11378.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





