Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5P43_21645 | Not Available | Positive | 3896330 - 3896504 | 7032.36 |
| hypothetical protein | C5P43_21650 | Not Available | Negative | 3896460 - 3896642 | 7034.55 |
| arac family transcriptional regulator | C5P43_21655 | Not Available | Positive | 3897187 - 3898023 | 32744.7 |
| is3 family transposase | C5P43_21660 | Not Available | Positive | 3898051 - 3898155 | 3986.88 |
| autotransporter outer membrane beta-barrel domain-containing protein | C5P43_21675 | Not Available | Positive | 3901371 - 3902781 | 48920.6 |
| microcin j25 efflux abc transporter yoji | C5P43_21685 | Not Available | Positive | 3902906 - 3904549 | 61572.4 |
| malate:quinone oxidoreductase | C5P43_21690 | Not Available | Positive | 3904767 - 3906413 | 60248.1 |
| ecotin | C5P43_21695 | Not Available | Negative | 3906562 - 3907050 | 18166.0 |
| hypothetical protein | C5P43_21700 | Not Available | Negative | 3907185 - 3907358 | 6538.12 |
| ferredoxin-type protein napf | C5P43_21705 | Not Available | Positive | 3907458 - 3907952 | 18048.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





