Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold-shock protein | C5P43_21490 | Not Available | Negative | 3874700 - 3874888 | 7203.67 |
| cold-shock protein cspi | C5P43_21495 | Not Available | Negative | 3874899 - 3875111 | 7684.14 |
| duf2514 domain-containing protein | C5P43_21500 | Not Available | Negative | 3875475 - 3875972 | 18263.8 |
| lysozyme | C5P43_21505 | Not Available | Negative | 3875969 - 3876502 | 19676.6 |
| hypothetical protein | C5P43_21510 | Not Available | Positive | 3876508 - 3877161 | 23458.3 |
| acidic protein msyb | C5P43_21515 | Not Available | Positive | 3877244 - 3877618 | 14259.9 |
| ycek/yidq family lipoprotein | C5P43_21520 | Not Available | Negative | 3877619 - 3877846 | 8431.25 |
| glucan biosynthesis protein h | C5P43_21525 | Not Available | Negative | 3878019 - 3880562 | 96942.7 |
| glucan biosynthesis protein g | C5P43_21530 | Not Available | Negative | 3880555 - 3882090 | 57885.4 |
| hypothetical protein | C5P43_21535 | Not Available | Positive | 3882161 - 3882292 | 4954.91 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





