Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| luxr family transcriptional regulator | C5P43_21290 | Not Available | Negative | 3846788 - 3847582 | 29571.3 |
| dna recombinase | C5P43_21295 | Not Available | Negative | 3847912 - 3848475 | 21803.6 |
| choline dehydrogenase | C5P43_21305 | Not Available | Negative | 3849550 - 3849950 | 14604.5 |
| estp | C5P43_21310 | Not Available | Negative | 3850047 - 3852650 | 99310.3 |
| restriction endonuclease | C5P43_21315 | Not Available | Negative | 3852653 - 3854827 | 82256.4 |
| is3 family transposase | C5P43_21320 | Not Available | Negative | 3855075 - 3856195 | 43098.1 |
| is5/is1182 family transposase | C5P43_21325 | Not Available | Negative | 3856405 - 3856596 | 7224.78 |
| hypothetical protein | C5P43_21330 | Not Available | Positive | 3856597 - 3856892 | 11400.9 |
| ethanolamine utilization protein | C5P43_21335 | Not Available | Negative | 3856993 - 3857175 | 6419.74 |
| hypothetical protein | C5P43_21345 | Not Available | Negative | 3857790 - 3857981 | 6827.95 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





