Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| periplasmic protein cpxp | C5P43_21125 | Not Available | Positive | 3818496 - 3818996 | 18966.4 |
| cation-efflux pump fief | C5P43_21130 | Not Available | Positive | 3819145 - 3820047 | 32929.2 |
| atp-dependent 6-phosphofructokinase | C5P43_21135 | Not Available | Positive | 3820228 - 3821190 | 34844.2 |
| sulfate-binding protein | C5P43_21140 | Not Available | Positive | 3821510 - 3822499 | 36661.2 |
| cdp-diacylglycerol diphosphatase | C5P43_21145 | Not Available | Positive | 3822606 - 3823063 | 17110.8 |
| autotransporter outer membrane beta-barrel domain-containing protein | C5P43_21150 | Not Available | Positive | 3823064 - 3825910 | 100543.0 |
| c-di-gmp phosphodiesterase | C5P43_21155 | Not Available | Positive | 3826052 - 3827140 | 40606.3 |
| lysr family transcriptional regulator | C5P43_21160 | Not Available | Negative | 3827182 - 3828114 | 34784.9 |
| duf1097 domain-containing protein | C5P43_21165 | Not Available | Negative | 3828206 - 3828703 | 17328.1 |
| hypothetical protein | C5P43_21170 | Not Available | Positive | 3828780 - 3829013 | 9022.03 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





