Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1287 domain-containing protein | C5P43_21075 | Not Available | Positive | 3807745 - 3808362 | 22987.4 |
| eama family transporter | C5P43_21080 | Not Available | Negative | 3808389 - 3809286 | 32508.9 |
| primary-amine oxidase | C5P43_21085 | Not Available | Positive | 3809287 - 3811269 | 73912.5 |
| nad-dependent phenylacetaldehyde dehydrogenase | C5P43_21090 | Not Available | Negative | 3811327 - 3812826 | 53736.1 |
| transcriptional activator fear | C5P43_21095 | Not Available | Positive | 3813062 - 3813967 | 34608.3 |
| duf1318 domain-containing protein | C5P43_21100 | Not Available | Negative | 3814139 - 3814465 | 11908.5 |
| ynbe family lipoprotein | C5P43_21105 | Not Available | Negative | 3814473 - 3814658 | 6826.49 |
| ydbh family protein | C5P43_21110 | Not Available | Negative | 3814655 - 3816184 | 56512.2 |
| two-component sensor histidine kinase | C5P43_21115 | Not Available | Negative | 3816278 - 3817651 | 51627.3 |
| dna-binding response regulator | C5P43_21120 | Not Available | Negative | 3817648 - 3818346 | 26313.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





