Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-d-ribose 1-methylphosphonate 5-triphosphate diphosphatase | C5P43_20975 | Not Available | Negative | 3786798 - 3787934 | 42034.8 |
| phosphonate c-p lyase system protein phnl | C5P43_20980 | Not Available | Negative | 3787931 - 3788215 | 10231.2 |
| acyltransferase | C5P43_20985 | Not Available | Positive | 3788218 - 3788667 | 16682.1 |
| transcription-repair coupling factor | C5P43_20990 | Not Available | Positive | 3788795 - 3792241 | 130001.0 |
| lysm peptidoglycan-binding domain-containing protein | C5P43_20995 | Not Available | Positive | 3792385 - 3793347 | 34621.9 |
| multiple stress resistance protein bhsa | C5P43_21000 | Not Available | Negative | 3793430 - 3793687 | 8815.55 |
| tetr family transcriptional regulator | C5P43_21005 | Not Available | Positive | 3793928 - 3794560 | 23427.0 |
| glycine zipper 2tm domain-containing protein | C5P43_21010 | Not Available | Negative | 3794622 - 3795161 | 18921.6 |
| membrane-bound pqq-dependent dehydrogenase, glucose/quinate/shikimate family | C5P43_21015 | Not Available | Negative | 3795303 - 3796810 | 55187.0 |
| hypoxanthine phosphoribosyltransferase | C5P43_21020 | Not Available | Positive | 3797016 - 3797552 | 20116.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





