Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5P43_20605 | Not Available | Negative | 3721733 - 3721972 | 8514.67 |
| phop regulon feedback inhibition membrane protein mgrb | C5P43_20610 | Not Available | Positive | 3722131 - 3722274 | 5552.09 |
| bene family transporter ydco | C5P43_20615 | Not Available | Negative | 3722595 - 3723809 | 42091.7 |
| xre family transcriptional regulator | C5P43_20620 | Not Available | Positive | 3723862 - 3724398 | 19751.4 |
| collagenase-like protease | C5P43_20625 | Not Available | Positive | 3724471 - 3726432 | 72734.0 |
| duf2554 domain-containing protein | C5P43_20630 | Not Available | Negative | 3726524 - 3726754 | 8709.32 |
| mrna interferase hica | C5P43_20635 | Not Available | Positive | 3726976 - 3727152 | 6782.3 |
| antitoxin hicb | C5P43_20640 | Not Available | Positive | 3727198 - 3727614 | 15247.5 |
| plp-dependent aminotransferase family protein | C5P43_20645 | Not Available | Positive | 3727693 - 3729099 | 52768.8 |
| spermidine/putrescine abc transporter substrate-binding protein | C5P43_20650 | Not Available | Positive | 3729344 - 3729981 | 23542.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





