Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrogen regulation protein nr(i) | C5P43_20450 | Not Available | Negative | 3689312 - 3690721 | 52271.9 |
| two-component system sensor histidine kinase ntrb | C5P43_20455 | Not Available | Negative | 3690733 - 3691782 | 38558.5 |
| dna-binding response regulator | C5P43_20460 | Not Available | Positive | 3691983 - 3692717 | 28722.6 |
| arac family transcriptional regulator | C5P43_20465 | Not Available | Positive | 3692730 - 3693587 | 32476.6 |
| phosphoenolpyruvate--protein phosphotransferase | C5P43_20470 | Not Available | Negative | 3693590 - 3696085 | 92193.3 |
| aminopeptidase | C5P43_20475 | Not Available | Negative | 3696110 - 3697147 | 37455.2 |
| aminopeptidase p family protein | C5P43_20480 | Not Available | Negative | 3697147 - 3698232 | 39594.2 |
| fructose-like permease iic component | C5P43_20485 | Not Available | Negative | 3698247 - 3699494 | 43955.0 |
| duf202 domain-containing protein | C5P43_20490 | Not Available | Negative | 3699564 - 3699718 | 5737.98 |
| hypothetical protein | C5P43_20495 | Not Available | Positive | 3699828 - 3700277 | 15730.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





