Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5P43_20150 | Not Available | Negative | 3639639 - 3639920 | 10304.0 |
| integrase | C5P43_20155 | Not Available | Positive | 3639879 - 3640025 | 5021.95 |
| eal domain-containing protein | C5P43_20160 | Not Available | Positive | 3640350 - 3641936 | 60834.8 |
| regulatory protein soxs | C5P43_20165 | Not Available | Negative | 3641939 - 3642262 | 12911.6 |
| redox-sensitive transcriptional activator soxr | C5P43_20170 | Not Available | Positive | 3642348 - 3642812 | 17150.7 |
| hypothetical protein | C5P43_20175 | Not Available | Positive | 3642799 - 3643065 | 10089.2 |
| hypothetical protein | C5P43_20180 | Not Available | Negative | 3643103 - 3643321 | 7878.41 |
| hypothetical protein | C5P43_20185 | Not Available | Positive | 3643260 - 3643457 | 7203.83 |
| guanine/hypoxanthine permease ghxp | C5P43_20190 | Not Available | Positive | 3643358 - 3644707 | 45714.4 |
| na+/h+ antiporter | C5P43_20195 | Not Available | Positive | 3644858 - 3645273 | 15070.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





