Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pp_03877 | C5P43_19725 | Not Available | Positive | 3564239 - 3564882 | Not Available |
| glutamate decarboxylase | C5P43_19730 | Not Available | Positive | 3564885 - 3565016 | 5061.07 |
| glutamate:gamma-aminobutyrate antiporter | C5P43_19735 | Not Available | Positive | 3565172 - 3566707 | 55080.0 |
| glycoside hydrolase family 10 protein | C5P43_19740 | Not Available | Positive | 3566838 - 3568157 | 49575.9 |
| diguanylate cyclase | C5P43_19745 | Not Available | Positive | 3568529 - 3569911 | 53210.8 |
| oxygen-sensing cyclic-di-gmp phosphodiesterase | C5P43_19750 | Not Available | Positive | 3569912 - 3572335 | 91195.7 |
| d-alanyl-d-alanine dipeptidase | C5P43_19755 | Not Available | Positive | 3572593 - 3573135 | 19969.8 |
| hypothetical protein | C5P43_19760 | Not Available | Negative | 3573136 - 3573758 | 24488.7 |
| hypothetical protein | C5P43_19765 | Not Available | Negative | 3573777 - 3573959 | 7273.12 |
| duf2776 domain-containing protein | C5P43_19770 | Not Available | Positive | 3574142 - 3575194 | 37659.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





