Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sam-dependent methyltransferase | C5P43_19510 | Not Available | Negative | 3527500 - 3528270 | 28406.7 |
| endonuclease/exonuclease/phosphatase family protein | C5P43_19515 | Not Available | Negative | 3528348 - 3529148 | 29993.4 |
| lysr family transcriptional regulator | C5P43_19520 | Not Available | Positive | 3529389 - 3530303 | 33776.8 |
| 2,5-diketo-d-gluconic acid reductase b | C5P43_19525 | Not Available | Negative | 3530300 - 3531103 | 29438.4 |
| Trna-asp | Not Available | Not Available | Positive | 3531266 - 3531342 | Not Available |
| hypothetical protein | C5P43_19540 | Not Available | Positive | 3531688 - 3532941 | 47852.8 |
| bifunctional isocitrate dehydrogenase kinase/phosphatase | C5P43_19545 | Not Available | Negative | 3532910 - 3534646 | 67674.3 |
| isocitrate lyase | C5P43_19550 | Not Available | Negative | 3534927 - 3536231 | 47524.1 |
| malate synthase a | C5P43_19555 | Not Available | Negative | 3536261 - 3537862 | 60321.0 |
| homoserine o-succinyltransferase | C5P43_19560 | Not Available | Negative | 3538131 - 3539060 | 35701.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





