Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate starvation protein phoh | C5P43_19410 | Not Available | Negative | 3514288 - 3514472 | 6617.85 |
| small-conductance mechanosensitive channel | C5P43_19415 | Not Available | Negative | 3514520 - 3515380 | 30897.9 |
| hypothetical protein | C5P43_19420 | Not Available | Negative | 3515403 - 3515627 | 8607.59 |
| class ii fructose-bisphosphate aldolase | C5P43_19425 | Not Available | Negative | 3515738 - 3516817 | 39149.4 |
| phosphoglycerate kinase | C5P43_19430 | Not Available | Negative | 3517032 - 3518195 | 41120.5 |
| d-erythrose-4-phosphate dehydrogenase | C5P43_19435 | Not Available | Negative | 3518245 - 3519264 | 37301.5 |
| erythrose 4-phosphate dehydrogenase | C5P43_19440 | Not Available | Negative | 3519218 - 3519319 | 4043.79 |
| duf296 domain-containing protein | C5P43_19445 | Not Available | Positive | 3519636 - 3520067 | 15532.7 |
| ecf transporter s component | C5P43_19450 | Not Available | Positive | 3520090 - 3520668 | 20071.7 |
| energy-coupling factor transporter transmembrane protein ecft | C5P43_19455 | Not Available | Positive | 3520669 - 3521376 | 26798.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





