Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molr family transcriptional regulator | C5P43_19305 | Not Available | Negative | 3488628 - 3492112 | 129735.0 |
| methionine--trna ligase | C5P43_19310 | Not Available | Negative | 3492253 - 3494286 | 76244.9 |
| protein mrp | C5P43_19315 | Not Available | Positive | 3494418 - 3495527 | 39940.4 |
| duf2574 domain-containing protein | C5P43_19320 | Not Available | Positive | 3495790 - 3496071 | 10137.2 |
| hypothetical protein | C5P43_19330 | Not Available | Positive | 3496364 - 3496906 | 19075.6 |
| hypothetical protein | C5P43_19335 | Not Available | Positive | 3496987 - 3497273 | 10530.2 |
| rok family transcriptional regulator | C5P43_19340 | Not Available | Positive | 3497444 - 3498664 | 44292.7 |
| dethiobiotin synthase | C5P43_19345 | Not Available | Positive | 3498789 - 3499484 | 24968.4 |
| voltage-gated clc-type chloride channel clcb | C5P43_19350 | Not Available | Negative | 3499437 - 3500729 | 45690.0 |
| tat proofreading chaperone dmsd | C5P43_19355 | Not Available | Negative | 3500889 - 3501503 | 23345.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





