Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ala | Not Available | Not Available | Positive | 3465716 - 3465791 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 3465831 - 3465906 | Not Available |
| sensor domain-containing phosphodiesterase | C5P43_19210 | Not Available | Positive | 3466115 - 3468304 | 83529.1 |
| nucleoside permease nupc | C5P43_19215 | Not Available | Negative | 3468353 - 3469555 | 43478.4 |
| divalent metal cation transporter | C5P43_19220 | Not Available | Positive | 3469891 - 3471129 | 44196.5 |
| type ii secretion system protein gspd | C5P43_19225 | Not Available | Positive | 3471439 - 3473499 | 74236.2 |
| type ii secretion system protein gspe | C5P43_19230 | Not Available | Positive | 3473499 - 3474992 | 55135.7 |
| type ii secretion system protein gspf | C5P43_19235 | Not Available | Positive | 3474992 - 3476215 | 44956.7 |
| type ii secretion system protein gspg | C5P43_19240 | Not Available | Positive | 3476205 - 3476687 | 17798.2 |
| type ii secretion system protein gsph | C5P43_19245 | Not Available | Positive | 3476691 - 3477254 | 21125.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





