Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4209 domain-containing protein | C5P43_19150 | Not Available | Positive | 3459076 - 3460863 | 67363.3 |
| duf977 domain-containing protein | C5P43_19155 | Not Available | Negative | 3461082 - 3461483 | 15357.6 |
| hypothetical protein | C5P43_19160 | Not Available | Negative | 3461524 - 3462489 | 36961.0 |
| Trna-lys | Not Available | Not Available | Positive | 3462619 - 3462694 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 3462699 - 3462774 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 3462821 - 3462896 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 3462941 - 3463016 | Not Available |
| glutamate--trna ligase | C5P43_19185 | Not Available | Positive | 3463275 - 3464690 | 53818.6 |
| hypothetical protein | C5P43_19190 | Not Available | Negative | 3464742 - 3465134 | 14911.0 |
| hypothetical protein | C5P43_19195 | Not Available | Negative | 3465136 - 3465480 | 12720.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





