Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5P43_19100 | Not Available | Negative | 3454317 - 3454643 | 12127.7 |
| Trna-arg | Not Available | Not Available | Positive | 3454781 - 3454857 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 3454958 - 3455033 | Not Available |
| antitermination protein | C5P43_19115 | Not Available | Negative | 3455177 - 3455998 | 30644.9 |
| hypothetical protein | C5P43_19120 | Not Available | Negative | 3455995 - 3456369 | 14298.6 |
| hypothetical protein | C5P43_19125 | Not Available | Negative | 3456382 - 3457431 | 39347.4 |
| hypothetical protein | C5P43_19130 | Not Available | Negative | 3457433 - 3457711 | 11347.4 |
| hypothetical protein | C5P43_19135 | Not Available | Negative | 3457778 - 3458029 | 9277.3 |
| type i toxin-antitoxin system hok family toxin | C5P43_19140 | Not Available | Negative | 3458246 - 3458458 | 7823.85 |
| hypothetical protein | C5P43_19145 | Not Available | Negative | 3458617 - 3458820 | 7273.45 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





