Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5P43_18935 | Not Available | Negative | 3428110 - 3430389 | 83450.9 |
| moxr family atpase | C5P43_18940 | Not Available | Negative | 3430400 - 3431488 | 39670.6 |
| hypothetical protein | C5P43_18945 | Not Available | Negative | 3432728 - 3433045 | 12584.9 |
| hypothetical protein | C5P43_18950 | Not Available | Negative | 3433106 - 3436317 | 122216.0 |
| transcriptional regulator nanr | C5P43_18955 | Not Available | Negative | 3436318 - 3436577 | 9821.88 |
| c4-dicarboxylate transporter | C5P43_18965 | Not Available | Positive | 3436957 - 3438324 | 48804.9 |
| stringent starvation protein b | C5P43_18970 | Not Available | Negative | 3438367 - 3438864 | 18263.4 |
| stringent starvation protein a | C5P43_18975 | Not Available | Negative | 3438870 - 3439508 | 24306.3 |
| hypothetical protein | C5P43_18980 | Not Available | Positive | 3439450 - 3439659 | 7747.15 |
| hypothetical protein | C5P43_18985 | Not Available | Negative | 3439611 - 3439790 | 6771.09 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





