Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding/permease cydd | C5P43_18630 | Not Available | Negative | 3376526 - 3378292 | 65046.0 |
| thioredoxin reductase | C5P43_18635 | Not Available | Negative | 3378415 - 3379380 | 34625.1 |
| leucine-responsive regulatory protein | C5P43_18645 | Not Available | Positive | 3379925 - 3380419 | 18887.9 |
| hypothetical protein | C5P43_18650 | Not Available | Positive | 3380554 - 3381857 | 47904.3 |
| ribonucleotide-diphosphate reductase subunit alpha | C5P43_18655 | Not Available | Negative | 3381858 - 3382216 | 13806.1 |
| class ib ribonucleoside-diphosphate reductase assembly flavoprotein nrdi | C5P43_18660 | Not Available | Negative | 3382189 - 3382599 | 15341.3 |
| nrdh-redoxin | C5P43_18665 | Not Available | Negative | 3382596 - 3382841 | 9139.98 |
| duf883 domain-containing protein | C5P43_18670 | Not Available | Negative | 3383089 - 3383418 | 11847.9 |
| hypothetical protein | C5P43_18675 | Not Available | Positive | 3383570 - 3383914 | 13066.5 |
| l-alanine exporter alae | C5P43_18680 | Not Available | Negative | 3383951 - 3384400 | 16950.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





