Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5P43_18580 | Not Available | Negative | 3369258 - 3369437 | 7114.67 |
| taurine abc transporter substrate-binding protein | C5P43_18585 | Not Available | Positive | 3369436 - 3370398 | 34267.9 |
| taurine abc transporter atp-binding subunit | C5P43_18590 | Not Available | Positive | 3370411 - 3371178 | 28282.5 |
| taurine abc transporter permease tauc | C5P43_18595 | Not Available | Positive | 3371175 - 3372002 | 29569.5 |
| taurine dioxygenase | C5P43_18600 | Not Available | Positive | 3371999 - 3372543 | 20617.1 |
| atp-dependent clp protease atp-binding subunit clpa | C5P43_18605 | Not Available | Positive | 3372544 - 3372870 | 12027.3 |
| Trna-ser | Not Available | Not Available | Positive | 3373214 - 3373301 | Not Available |
| translation initiation factor if-1 | C5P43_18615 | Not Available | Negative | 3373555 - 3373773 | 8250.1 |
| leucyl/phenylalanyl-trna--protein transferase | C5P43_18620 | Not Available | Negative | 3374058 - 3374762 | 26620.0 |
| cysteine/glutathione abc transporter atp-binding protein/permease cydc | C5P43_18625 | Not Available | Negative | 3374804 - 3376525 | 62881.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





