Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombinase | C5P43_00075 | Not Available | Positive | 16463 - 17014 | 20363.7 |
| transposase | C5P43_00080 | Not Available | Positive | 17030 - 19126 | 80334.1 |
| duf4238 domain-containing protein | C5P43_00085 | Not Available | Negative | 19605 - 20606 | 38331.1 |
| hypothetical protein | C5P43_00090 | Not Available | Positive | 20909 - 23584 | 99669.3 |
| hypothetical protein | C5P43_00105 | Not Available | Negative | 24342 - 25226 | 33695.7 |
| replication protein repa4 | C5P43_00110 | Not Available | Positive | 25457 - 25597 | 5217.34 |
| Ncrna_class:antisense_rna | Not Available | Not Available | Positive | 26054 - 26161 | Not Available |
| incfii family plasmid replication initiator repa | C5P43_00120 | Not Available | Negative | 26160 - 27017 | 32700.6 |
| hypothetical protein | C5P43_00125 | Not Available | Negative | 27010 - 27504 | 18189.9 |
| positive regulator of repfic repa1 expression | C5P43_00130 | Not Available | Negative | 27485 - 27559 | 2588.29 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





