Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp synthase subunit alpha | C5P43_18475 | Not Available | Negative | 3347209 - 3348750 | 55225.4 |
| atp synthase subunit delta | C5P43_18480 | Not Available | Negative | 3348763 - 3349296 | 19333.3 |
| atp synthase subunit b | C5P43_18485 | Not Available | Negative | 3349311 - 3349781 | 17264.9 |
| atp synthase subunit c | C5P43_18490 | Not Available | Negative | 3349843 - 3350082 | 8256.71 |
| atp synthase subunit a | C5P43_18495 | Not Available | Negative | 3350129 - 3350944 | 30305.1 |
| atp synthase i | C5P43_18500 | Not Available | Negative | 3350953 - 3351333 | 13632.5 |
| ribosomal rna small subunit methyltransferase g | C5P43_18505 | Not Available | Negative | 3351950 - 3352573 | 23432.5 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | C5P43_18510 | Not Available | Negative | 3352637 - 3353476 | 31192.0 |
| tail assembly protein | C5P43_18515 | Not Available | Positive | 3353492 - 3354004 | 17655.2 |
| host specificity protein j | C5P43_18520 | Not Available | Positive | 3354064 - 3357462 | 124558.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





