Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatidylglycerophosphatase c | C5P43_18425 | Not Available | Positive | 3340460 - 3341095 | 24440.8 |
| trna adenosine(34) deaminase tada | C5P43_18430 | Not Available | Positive | 3341120 - 3341656 | 20027.3 |
| lytic transglycosylase f | C5P43_18435 | Not Available | Negative | 3341653 - 3343209 | 58291.2 |
| phosphoribosylglycinamide synthetase | C5P43_18440 | Not Available | Positive | 3343303 - 3343452 | 5644.69 |
| phosphoribosylglycinamide synthetase | C5P43_18445 | Not Available | Positive | 3343467 - 3343910 | 16640.9 |
| bifunctional n-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase | C5P43_18450 | Not Available | Negative | 3343911 - 3344095 | 6492.05 |
| hypothetical protein | C5P43_18455 | Not Available | Positive | 3344295 - 3344474 | 6911.46 |
| atp synthase epsilon chain | C5P43_18460 | Not Available | Negative | 3344446 - 3344865 | 15069.2 |
| atp synthase subunit beta | C5P43_18465 | Not Available | Negative | 3344886 - 3346268 | 50328.5 |
| atp synthase subunit gamma | C5P43_18470 | Not Available | Negative | 3346295 - 3347158 | 31579.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





