Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5P43_18370 | Not Available | Negative | 3334726 - 3335004 | 10139.4 |
| ribonuclease 3 | C5P43_18375 | Not Available | Positive | 3334948 - 3335628 | 25551.6 |
| gtpase era | C5P43_18380 | Not Available | Positive | 3335625 - 3336530 | 33798.1 |
| dna repair protein reco | C5P43_18385 | Not Available | Positive | 3336542 - 3337270 | 27364.1 |
| pyridoxine 5'-phosphate synthase | C5P43_18390 | Not Available | Positive | 3337282 - 3338013 | 26385.9 |
| holo-acp synthase | C5P43_18395 | Not Available | Positive | 3338013 - 3338393 | 14095.2 |
| hypothetical protein | C5P43_18405 | Not Available | Positive | 3338652 - 3338816 | 6009.23 |
| small toxic protein shob | C5P43_18410 | Not Available | Positive | 3338813 - 3338893 | 3103.22 |
| ferredoxin | C5P43_18415 | Not Available | Negative | 3339087 - 3339347 | 9791.79 |
| murr/rpir family transcriptional regulator | C5P43_18420 | Not Available | Negative | 3339403 - 3340251 | 30709.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





