Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5P43_18270 | Not Available | Negative | 3314397 - 3314831 | 15533.8 |
| glycine--trna ligase subunit beta | C5P43_18275 | Not Available | Negative | 3314832 - 3315658 | 30248.2 |
| glycine--trna ligase subunit alpha | C5P43_18280 | Not Available | Negative | 3315668 - 3316579 | 34718.2 |
| hypothetical protein | C5P43_18285 | Not Available | Negative | 3316674 - 3316973 | 11324.8 |
| o-acetyltransferase | C5P43_18290 | Not Available | Positive | 3317148 - 3318143 | 37600.1 |
| hypothetical protein | C5P43_18295 | Not Available | Negative | 3318185 - 3318622 | 16123.6 |
| hypothetical protein | C5P43_18300 | Not Available | Negative | 3318668 - 3319009 | 12553.0 |
| xylulokinase | C5P43_18305 | Not Available | Negative | 3319178 - 3320632 | 52681.4 |
| xylose isomerase | C5P43_18310 | Not Available | Negative | 3320704 - 3322026 | 49721.7 |
| d-xylose abc transporter substrate-binding protein | C5P43_18315 | Not Available | Positive | 3322392 - 3323384 | 35722.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





