Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holliday junction branch migration dna helicase ruvb | C5P43_18075 | Not Available | Positive | 3286043 - 3287053 | 37176.0 |
| zinc abc transporter permease | C5P43_18080 | Not Available | Negative | 3287200 - 3287985 | 27762.5 |
| mn2+/zn2+abc transporter atp-binding protein | C5P43_18085 | Not Available | Negative | 3287982 - 3288737 | 27869.3 |
| zinc abc transporter substrate-binding protein | C5P43_18090 | Not Available | Positive | 3288816 - 3289748 | 33851.3 |
| murein dd-endopeptidase mepm | C5P43_18095 | Not Available | Positive | 3289764 - 3291086 | 49060.6 |
| lauroyl-kdo(2)-lipid iv(a) myristoyltransferase | C5P43_18100 | Not Available | Positive | 3291206 - 3292177 | 37412.5 |
| pyruvate kinase | C5P43_18105 | Not Available | Negative | 3292308 - 3293750 | 51360.3 |
| murr/rpir family transcriptional regulator | C5P43_18110 | Not Available | Negative | 3293878 - 3294747 | 31977.4 |
| glucose-6-phosphate dehydrogenase | C5P43_18115 | Not Available | Positive | 3295085 - 3295254 | 6156.48 |
| mfs transporter | C5P43_18210 | Not Available | Negative | 3305050 - 3305207 | 5616.05 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





