Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-ketoacyl-acp reductase | C5P43_17975 | Not Available | Positive | 3266239 - 3267030 | 28508.5 |
| sugar phosphate isomerase/epimerase | C5P43_17980 | Not Available | Positive | 3267040 - 3267882 | 30965.0 |
| acyl-coa hydratase | C5P43_17985 | Not Available | Positive | 3267892 - 3268668 | 28648.6 |
| acyl coa:acetate/3-ketoacid coa transferase | C5P43_17990 | Not Available | Positive | 3268678 - 3270219 | 55585.7 |
| fad-binding protein | C5P43_17995 | Not Available | Positive | 3270216 - 3272297 | 76125.5 |
| trap transporter small permease | C5P43_18000 | Not Available | Positive | 3272318 - 3272794 | 17470.3 |
| trap transporter large permease | C5P43_18005 | Not Available | Positive | 3272837 - 3274138 | 45900.5 |
| hypothetical protein | C5P43_18010 | Not Available | Positive | 3274191 - 3275162 | 35967.6 |
| 50s ribosomal protein l9 | C5P43_18015 | Not Available | Negative | 3275274 - 3275347 | 2597.05 |
| lysr family transcriptional regulator | C5P43_18020 | Not Available | Positive | 3275348 - 3275971 | 23183.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





