Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1315 domain-containing protein | C5P43_17790 | Not Available | Negative | 3224950 - 3225078 | 4790.82 |
| tail fiber assembly protein | C5P43_17830 | Not Available | Positive | 3234618 - 3235193 | 21312.9 |
| alpha-2-macroglobulin | C5P43_17835 | Not Available | Positive | 3235261 - 3236910 | 60628.9 |
| duf2300 domain-containing protein | C5P43_17840 | Not Available | Positive | 3236911 - 3238560 | 61479.2 |
| duf2135 domain-containing protein | C5P43_17845 | Not Available | Positive | 3238565 - 3239341 | 28291.2 |
| hybrid sensor histidine kinase/response regulator | C5P43_17850 | Not Available | Positive | 3239616 - 3242465 | 106513.0 |
| dna-binding response regulator | C5P43_17855 | Not Available | Negative | 3242665 - 3243315 | 23672.0 |
| phosphotransferase rcsd | C5P43_17860 | Not Available | Negative | 3243332 - 3245338 | 74733.3 |
| fructose-bisphosphatase class ii | C5P43_17865 | Not Available | Negative | 3245339 - 3246141 | 28249.3 |
| glycerol kinase | C5P43_17870 | Not Available | Negative | 3246277 - 3247785 | 56233.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





