Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5P43_17740 | Not Available | Positive | 3214784 - 3215124 | 12103.6 |
| bifunctional nicotinamidase/pyrazinamidase | C5P43_17745 | Not Available | Positive | 3215135 - 3215776 | 23394.3 |
| mfs transporter | C5P43_17750 | Not Available | Negative | 3215869 - 3217227 | 50268.9 |
| deor/glpr transcriptional regulator | C5P43_17755 | Not Available | Negative | 3217344 - 3218102 | 28252.0 |
| oxidoreductase | C5P43_17760 | Not Available | Negative | 3218239 - 3219219 | 36330.9 |
| sugar kinase | C5P43_17765 | Not Available | Negative | 3219229 - 3220176 | 34123.2 |
| ketose-bisphosphate aldolase | C5P43_17770 | Not Available | Negative | 3220181 - 3221017 | 30811.5 |
| nad(p)-dependent alcohol dehydrogenase | C5P43_17775 | Not Available | Negative | 3221038 - 3222081 | 37886.3 |
| mfs transporter | C5P43_17780 | Not Available | Negative | 3222098 - 3223477 | 49590.9 |
| oxidoreductase | C5P43_17785 | Not Available | Negative | 3223504 - 3224580 | 38715.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





