Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome bd-i oxidase subunit cydx | C5P43_17465 | Not Available | Positive | 3166818 - 3166931 | 4041.9 |
| cyd operon protein ybge | C5P43_17470 | Not Available | Positive | 3166931 - 3167224 | 10933.0 |
| acyl-coa thioester hydrolase ybgc | C5P43_17475 | Not Available | Positive | 3167374 - 3167778 | 15562.9 |
| protein tolq | C5P43_17480 | Not Available | Positive | 3167775 - 3168467 | 25599.2 |
| protein tolr | C5P43_17485 | Not Available | Positive | 3168471 - 3168899 | 15383.9 |
| cell envelope integrity/translocation protein tola | C5P43_17490 | Not Available | Positive | 3168964 - 3170229 | 43158.6 |
| protein tolb | C5P43_17495 | Not Available | Positive | 3170362 - 3171654 | 45958.1 |
| peptidoglycan-associated lipoprotein | C5P43_17500 | Not Available | Positive | 3171689 - 3172210 | 18825.3 |
| cell division protein cpob | C5P43_17505 | Not Available | Positive | 3172220 - 3173011 | 28263.9 |
| Trna-lys | Not Available | Not Available | Positive | 3173176 - 3173251 | Not Available |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





