Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine recombinase xerc | C5P43_17365 | Not Available | Negative | 3149535 - 3150431 | 33869.7 |
| duf484 domain-containing protein | C5P43_17370 | Not Available | Negative | 3150428 - 3151135 | 26730.4 |
| diaminopimelate epimerase | C5P43_17375 | Not Available | Negative | 3151132 - 3151956 | 30210.4 |
| hypothetical protein | C5P43_17380 | Not Available | Negative | 3151993 - 3152162 | 5818.75 |
| ribosome biogenesis gtpase der | C5P43_17385 | Not Available | Positive | 3152163 - 3152654 | 18921.1 |
| hypothetical protein | C5P43_17390 | Not Available | Positive | 3152723 - 3152938 | 7901.64 |
| exodeoxyribonuclease vii large subunit | C5P43_17395 | Not Available | Negative | 3152935 - 3154305 | 51863.4 |
| imp dehydrogenase | C5P43_17400 | Not Available | Positive | 3154467 - 3155933 | 52025.6 |
| gmp synthase (glutamine-hydrolyzing) | C5P43_17405 | Not Available | Positive | 3156002 - 3157579 | 58668.5 |
| hypothetical protein | C5P43_17410 | Not Available | Negative | 3157672 - 3158211 | 20259.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





