Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional d-altronate/d-mannonate dehydratase | C5P43_17315 | Not Available | Negative | 3140329 - 3141482 | 43506.8 |
| hypothetical protein | C5P43_17320 | Not Available | Negative | 3141708 - 3142007 | 11445.4 |
| hypothetical protein | C5P43_17325 | Not Available | Positive | 3142328 - 3142606 | 10035.6 |
| magnesium transporter cora | C5P43_17330 | Not Available | Negative | 3142631 - 3142828 | 7707.8 |
| duf3289 domain-containing protein | C5P43_17335 | Not Available | Positive | 3142964 - 3143812 | 32491.6 |
| duf943 domain-containing protein | C5P43_17340 | Not Available | Positive | 3143809 - 3144288 | 19069.8 |
| magnesium transporter cora | C5P43_17345 | Not Available | Negative | 3144342 - 3145292 | 36591.8 |
| hypothetical protein | C5P43_17350 | Not Available | Positive | 3145662 - 3146426 | 28055.2 |
| dna helicase ii | C5P43_17355 | Not Available | Negative | 3146573 - 3148735 | 81994.7 |
| flavin mononucleotide phosphatase yigb | C5P43_17360 | Not Available | Negative | 3148819 - 3149535 | 27123.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





