Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonucleoside hydrolase rihc | C5P43_17155 | Not Available | Positive | 3109295 - 3109432 | 4663.56 |
| 4-hydroxy-tetrahydrodipicolinate reductase | C5P43_17160 | Not Available | Positive | 3109599 - 3110420 | 28731.3 |
| carbamoyl-phosphate synthase small subunit | C5P43_17170 | Not Available | Positive | 3110876 - 3112024 | 41433.4 |
| carbamoyl phosphate synthase large subunit | C5P43_17175 | Not Available | Positive | 3112042 - 3115263 | 117877.0 |
| hypothetical protein | C5P43_17180 | Not Available | Negative | 3115271 - 3115489 | 8226.95 |
| caif/grla family transcriptional regulator | C5P43_17185 | Not Available | Positive | 3115524 - 3115919 | 15393.0 |
| carnitine operon protein caie | C5P43_17190 | Not Available | Negative | 3116005 - 3116595 | 21157.6 |
| crotonobetainyl-coa hydratase | C5P43_17195 | Not Available | Negative | 3116601 - 3117386 | 28175.8 |
| atp-dependent acyl-coa ligase | C5P43_17200 | Not Available | Negative | 3117495 - 3119048 | 58506.3 |
| l-carnitine coa-transferase | C5P43_17205 | Not Available | Negative | 3119122 - 3120051 | 34286.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





