Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts galactitol transporter subunit iic | C5P43_16980 | Not Available | Positive | 3076192 - 3076847 | 23782.8 |
| regulatory protein mokc | C5P43_16985 | Not Available | Negative | 3077023 - 3077232 | 7742.74 |
| na+/h+ antiporter nhaa | C5P43_16990 | Not Available | Positive | 3077761 - 3078927 | 41358.3 |
| transcriptional activator nhar | C5P43_16995 | Not Available | Positive | 3078987 - 3079892 | 34258.3 |
| fimbrial family protein | C5P43_17000 | Not Available | Negative | 3079931 - 3080458 | 19982.2 |
| type iii effector | C5P43_17015 | Not Available | Negative | 3082480 - 3083901 | 55748.0 |
| 30s ribosomal protein s20 | C5P43_17020 | Not Available | Negative | 3084385 - 3084648 | 9684.94 |
| duf2575 domain-containing protein | C5P43_17025 | Not Available | Positive | 3084751 - 3084969 | 7899.85 |
| bifunctional riboflavin kinase/fmn adenylyltransferase | C5P43_17030 | Not Available | Positive | 3084977 - 3085918 | 34736.4 |
| isoleucine--trna ligase | C5P43_17035 | Not Available | Positive | 3085961 - 3087681 | 63858.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





