Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdopterin guanine dinucleotide-containing s/n-oxide reductase | C5P43_16880 | Not Available | Negative | 3057967 - 3060300 | 85908.5 |
| lipoprotein | C5P43_16885 | Not Available | Positive | 3060453 - 3061112 | 22198.6 |
| bifunctional glyoxylate/hydroxypyruvate reductase b | C5P43_16890 | Not Available | Positive | 3061216 - 3062190 | 35398.5 |
| duf3053 domain-containing protein | C5P43_16895 | Not Available | Negative | 3062240 - 3062950 | 25678.5 |
| transcriptional regulator | C5P43_16900 | Not Available | Positive | 3063384 - 3063674 | 11033.5 |
| cold-shock protein | C5P43_16905 | Not Available | Positive | 3063955 - 3064167 | 7403.66 |
| hok/gef family protein | C5P43_16910 | Not Available | Negative | 3064355 - 3064567 | 8133.28 |
| glycine--trna ligase subunit beta | C5P43_16915 | Not Available | Negative | 3064833 - 3065816 | 36540.9 |
| hydroxyethylthiazole kinase | C5P43_16920 | Not Available | Positive | 3065817 - 3065955 | 4966.83 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | C5P43_16925 | Not Available | Positive | 3065952 - 3066752 | 28635.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





