Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murein biosynthesis integral membrane protein murj | C5P43_16775 | Not Available | Negative | 3043479 - 3044305 | 29801.3 |
| oxidoreductase | C5P43_16780 | Not Available | Negative | 3044415 - 3045338 | 33683.4 |
| duf480 domain-containing protein | C5P43_16785 | Not Available | Negative | 3045340 - 3045987 | 24151.7 |
| 30s ribosomal protein s5 alanine n-acetyltransferase | C5P43_16790 | Not Available | Negative | 3045998 - 3046582 | 22689.1 |
| multidrug transporter mdth | C5P43_16795 | Not Available | Positive | 3046818 - 3048026 | 44375.0 |
| glutaredoxin 2 | C5P43_16800 | Not Available | Positive | 3048090 - 3048737 | 24317.6 |
| lipoprotein | C5P43_16805 | Not Available | Positive | 3048871 - 3049431 | 20501.0 |
| dihydroorotase | C5P43_16810 | Not Available | Positive | 3049537 - 3050583 | 38828.6 |
| dna-damage-inducible protein i | C5P43_16815 | Not Available | Positive | 3050657 - 3050902 | 8949.43 |
| transcriptional regulator | C5P43_16825 | Not Available | Positive | 3051192 - 3051446 | 9633.29 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





