Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4154 domain-containing protein | C5P43_16725 | Not Available | Positive | 3036386 - 3036904 | 18979.2 |
| ggdef domain-containing protein | C5P43_16730 | Not Available | Positive | 3036894 - 3038120 | 45992.1 |
| hypothetical protein | C5P43_16735 | Not Available | Positive | 3038136 - 3038618 | 17259.6 |
| 50s ribosomal protein l19 | C5P43_16740 | Not Available | Negative | 3038695 - 3039042 | 13134.0 |
| trna (guanosine(37)-n1)-methyltransferase trmd | C5P43_16745 | Not Available | Negative | 3039084 - 3039851 | 28424.0 |
| ribosome maturation factor rimm | C5P43_16750 | Not Available | Negative | 3039882 - 3040430 | 20606.6 |
| 30s ribosomal protein s16 | C5P43_16755 | Not Available | Negative | 3040449 - 3040697 | 9191.08 |
| signal recognition particle protein | C5P43_16760 | Not Available | Negative | 3040834 - 3042195 | 49790.5 |
| inner membrane protein ypjd | C5P43_16765 | Not Available | Positive | 3042362 - 3043153 | 29263.9 |
| hypothetical protein | C5P43_16770 | Not Available | Positive | 3043174 - 3043478 | 11128.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





