Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ftr1 family protein | C5P43_16515 | Not Available | Negative | 2997879 - 2998709 | 30379.7 |
| hypothetical protein | C5P43_16525 | Not Available | Negative | 2998967 - 2999176 | 7614.26 |
| sodium:proline symporter | C5P43_16530 | Not Available | Negative | 2999251 - 3000759 | 54347.3 |
| hypothetical protein | C5P43_16535 | Not Available | Positive | 3000839 - 3001030 | 7409.98 |
| hypothetical protein | C5P43_16540 | Not Available | Negative | 3000918 - 3001127 | 7779.91 |
| trifunctional transcriptional regulator/proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase | C5P43_16545 | Not Available | Positive | 3001182 - 3005144 | 143762.0 |
| transcriptional regulator | C5P43_16550 | Not Available | Negative | 3005184 - 3005822 | 23688.9 |
| pyrimidine monooxygenase ruta | C5P43_16555 | Not Available | Positive | 3006053 - 3007201 | 42221.2 |
| peroxyureidoacrylate/ureidoacrylate amidohydrolase rutb | C5P43_16560 | Not Available | Positive | 3007201 - 3007893 | 25211.0 |
| pyrimidine utilization protein c | C5P43_16565 | Not Available | Positive | 3007905 - 3008291 | 13763.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





