Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminoglycoside o-phosphotransferase aph(6)-id | C5P43_16355 | Not Available | Negative | 2962580 - 2963416 | 30825.7 |
| aminoglycoside o-phosphotransferase aph(3'')-ib | C5P43_16360 | Not Available | Negative | 2963416 - 2964219 | 29588.2 |
| is3-like element is1133 family transposase | C5P43_16365 | Not Available | Negative | 2964326 - 2965455 | 43767.1 |
| recombinase family protein | C5P43_16370 | Not Available | Negative | 2965520 - 2966134 | 22262.9 |
| tn3 family transposase | C5P43_16375 | Not Available | Positive | 2966260 - 2969145 | 107368.0 |
| hypothetical protein | C5P43_16385 | Not Available | Positive | 2969443 - 2969661 | 7699.35 |
| pas domain s-box protein | C5P43_16395 | Not Available | Negative | 2970565 - 2972142 | 56541.9 |
| transposase | C5P43_16400 | Not Available | Positive | 2972452 - 2973012 | 21288.5 |
| duf4158 domain-containing protein | C5P43_16405 | Not Available | Positive | 2973016 - 2974356 | 50605.2 |
| tetraacyldisaccharide 4'-kinase | C5P43_16410 | Not Available | Negative | 2974357 - 2974925 | 20885.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





