Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s12 methylthiotransferase accessory protein ycao | C5P43_16305 | Not Available | Positive | 2950369 - 2952129 | 65655.0 |
| formate transporter foca | C5P43_16310 | Not Available | Positive | 2952535 - 2953392 | 30992.6 |
| formate c-acetyltransferase | C5P43_16315 | Not Available | Positive | 2953447 - 2955729 | 85341.0 |
| pyruvate formate lyase-activating protein | C5P43_16320 | Not Available | Positive | 2955921 - 2956661 | 28205.9 |
| hypothetical protein | C5P43_16325 | Not Available | Negative | 2956743 - 2957333 | 23009.3 |
| lysr family transcriptional regulator | C5P43_16330 | Not Available | Positive | 2957433 - 2958341 | 34188.2 |
| inner membrane transporter ycam | C5P43_16335 | Not Available | Negative | 2958342 - 2959772 | 52481.5 |
| mfs transporter | C5P43_16340 | Not Available | Negative | 2959982 - 2961130 | 41446.2 |
| hydrolase | C5P43_16345 | Not Available | Positive | 2961444 - 2962070 | 23119.6 |
| dimethyl sulfoxide reductase | C5P43_16350 | Not Available | Negative | 2962106 - 2962348 | 8479.72 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





